Using description logics to evaluate the consistency of drug-class membership relations in NDF-RT
نویسندگان
چکیده
BACKGROUND The NDF-RT (National Drug File Reference Terminology) is an ontology, which describes drugs and their properties and supports computerized physician order entry systems. NDF-RT's classes are mostly specified using only necessary conditions and lack sufficient conditions, making its use limited until recently, when asserted drug-class relations were added. The addition of these asserted drug-class relations presents an opportunity to compare them with drug-class relations that can be inferred using the properties of drugs and drug classes in NDF-RT. METHODS We enriched NDF-RT's drug-classes with sufficient conditions, added property equivalences, and then used an OWL reasoner to infer drug-class membership relations. We compared the inferred class relations to the recently added asserted relations derived from FDA Structured Product Labels. RESULTS The inferred and asserted relations only match in about 50% of the cases, due to incompleteness of the drug descriptions and quality issues in the class definitions. CONCLUSIONS This investigation quantifies and categorizes the disparities between asserted and inferred drug-class relations and illustrates issues with class definitions and drug descriptions. In addition, it serves as an example of the benefits DL can add to ontology development and evaluation.
منابع مشابه
Evaluating the consistency of inferred drug-class membership re- lations in NDF-RT
Objectives: To evaluate the consistency of inferred drugclass membership relations in NDF-RT (National Drug File Reference Terminology). Methods: We use an OWL reasoner to infer the drug-class membership relations from the class definitions and the descriptions of drugs and compare them to asserted relations. Results: The inferred and asserted relations only match in about 50% of the cases. Con...
متن کاملRxClass - Navigating between Drug Classes and RxNorm Drugs
Objectives: To demonstrate RxClass, a web interactive browser to explore the relationships between RxNorm drugs and drug classes from several sources including ATC, MeSH and NDF-RT. RxClass is publicly available at: http://mor.nlm.nih.gov/RxClass/ I. MOTIVATION Drug classes constitute important information about the drugs and are critical to important use cases, such as clinical decision suppor...
متن کاملLetter: Further revamping VA's NDF-RT drug terminology for clinical research
Biomedical terminology and vocabulary standards (for the purposes of this correspondence , we use the terms 'terminology,' 'vocabulary' and 'ontology' interchangeably.) play an important role in enabling consistent, comparable, and meaningful sharing of data within and across institutional boundaries, as well as ensuring semantic interoperability. An important domain for developing standardized...
متن کاملProfiling structured product labeling with NDF-RT and RxNorm
UNLABELLED BACKGROUND Structured Product Labeling (SPL) is a document markup standard approved by Health Level Seven (HL7) and adopted by United States Food and Drug Administration (FDA) as a mechanism for exchanging drug product information. The SPL drug labels contain rich information about FDA approved clinical drugs. However, the lack of linkage to standard drug ontologies hinders their ...
متن کاملEvaluating NDF-RT
The National Drug File Reference Terminology (NDF-RT) presents a large set of drug classes which can potentially be used in clincal settings. Using semantic web technologies such as XML (eXtensible Markup Language) and RDF (Resource Description Framework), the drug classes in NDF-RT were enriched for the purpose of comparison to themselves and to drug classes in other terminologies. Methods and...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره 6 شماره
صفحات -
تاریخ انتشار 2015